BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E03SP1|AL425543
(937 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig338 1447 0.0
>3x_Contig338
Length = 1303
Score = 1447 bits (728), Expect = 0.0
Identities = 730/732 (99%)
Strand = Plus / Plus
Query: 206 tcttatcactatatacgaacccaatacatcgctctcttgtaaataamaagaaaaaagcca 265
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 tcttatcactatatacgaacccaatacatcgctctcttgtaaataacaagaaaaaagcca 60
Query: 266 ggaaaaaaaaaacaaaacgcatctttcaggtcgaacctacaccgcgttctgagtactgtt 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaaaaaaaaaacaaaacgcatctttcaggtcgaacctacaccgcgttctgagtactgtt 120
Query: 326 agaaataaacgctctagaaatttttcctgcgttttcctgtcctgttttccattcgatttc 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaaataaacgctctagaaatttttcctgcgttttcctgtcctgttttccattcgatttc 180
Query: 386 acagaaactcacagtcgtgaaaatatgaaatgctggcgaaaacccagattttttcacaga 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acagaaactcacagtcgtgaaaatatgaaatgctggcgaaaacccagattttttcacaga 240
Query: 446 tttggaaattgatatttggaaggaaaaaagattcgaaggttttcatttcaattaacattt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttggaaattgatatttggaaggaaaaaagattcgaaggttttcatttcaattaacattt 300
Query: 506 tgagacacccattggtagaattcgtgtttatgatctcaatttgatataaaccctctgtgt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgagacacccattggtagaattcgtgtttatgatctcaatttgatataaaccctctgtgt 360
Query: 566 actattacttggaaggcgatttcagagtcattaatagcttaagtttatacccgaggtgcc 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actattacttggaaggcgatttcagagtcattaatagcttaagtttatacccgaggtgcc 420
Query: 626 agaaaggatagagttctattctacattgcaattgtaaccttttttattgttttattcttt 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaaaggatagagttctattctacattgcaattgtaaccttttttattgttttattcttt 480
Query: 686 taatctaagtgtgttaaagaagagatctacattcactcactcacgtataccagtttattc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taatctaagtgtgttaaagaagagatctacattcactcactcacgtataccagtttattc 540
Query: 746 actcgaggaagatattgatttatatcagaatagagtttttttgttttacgttaaatttgc 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actcgaggaagatattgatttatatcagaatagagtttttttgttttacgttaaatttgc 600
Query: 806 caacatagaatagcaatgtctgctgaagaatcacaacaagcacaaactgagactgcagca 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caacatagaatagcaatgtctgctgaagaatcacaacaagcacaaactgagactgcagca 660
Query: 866 ccagttccggttccagctccagctgtcgaacaggatcattccaatgaagctactacaamc 925
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 661 ccagttccggttccagctccagctgtcgaacaggatcattccaatgaagctactacaacc 720
Query: 926 gtcgaagagaaa 937
||||||||||||
Sbjct: 721 gtcgaagagaaa 732
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9084
Number of Sequences: 1807
Number of extensions: 9084
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)